Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.76■□□□□ 0.27
Scamp1Q8K021 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.76■□□□□ 0.27
Scamp1Q8K021 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.76■□□□□ 0.27
Scamp1Q8K021 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.76■□□□□ 0.27
Scamp1Q8K021 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.76■□□□□ 0.27
Scamp1Q8K021 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp1Q8K021 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.75■□□□□ 0.27
Scamp1Q8K021 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Gm6345-202ENSMUST00000180900 204 ntBASIC16.75■□□□□ 0.27
Scamp1Q8K021 Mir8112-201ENSMUST00000184382 131 ntBASIC16.75■□□□□ 0.27
Scamp1Q8K021 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.75■□□□□ 0.27
Scamp1Q8K021 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.74■□□□□ 0.27
Scamp1Q8K021 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Gm7213-201ENSMUST00000215977 950 ntBASIC16.74■□□□□ 0.27
Scamp1Q8K021 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Gm10566-201ENSMUST00000086739 996 ntBASIC16.74■□□□□ 0.27
Scamp1Q8K021 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.74■□□□□ 0.27
Scamp1Q8K021 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp1Q8K021 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.73■□□□□ 0.27
Scamp1Q8K021 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scamp1Q8K021 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scamp1Q8K021 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.72■□□□□ 0.27
Scamp1Q8K021 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms