Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zc3h3Q8CHP0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zc3h3Q8CHP0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.73■□□□□ 0.27
Zc3h3Q8CHP0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.73■□□□□ 0.27
Zc3h3Q8CHP0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Gm26308-201ENSMUST00000157768 69 ntBASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Gm15590-201ENSMUST00000078419 552 ntBASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zc3h3Q8CHP0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zc3h3Q8CHP0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Zc3h3Q8CHP0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zc3h3Q8CHP0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms