Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Gm25990-201ENSMUST00000102440 86 ntBASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Gm13036-201ENSMUST00000117799 748 ntBASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Gm12260-201ENSMUST00000122447 411 ntBASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rp1l1Q8CGM2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rp1l1Q8CGM2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Gm15467-201ENSMUST00000120582 445 ntBASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Gm7063-201ENSMUST00000186840 981 ntBASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rp1l1Q8CGM2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Gm14494-201ENSMUST00000118786 435 ntBASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Gm2213-201ENSMUST00000197485 688 ntBASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rp1l1Q8CGM2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Gm25911-201ENSMUST00000157621 56 ntBASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rp1l1Q8CGM2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Gm13312-201ENSMUST00000119631 718 ntBASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Gm6736-201ENSMUST00000166583 948 ntBASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Gm7506-201ENSMUST00000207758 815 ntBASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms