Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc28bQ8CEG5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc28bQ8CEG5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc28bQ8CEG5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Zfp783-201ENSMUST00000095946 670 ntBASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc28bQ8CEG5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc28bQ8CEG5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Gm2399-201ENSMUST00000104944 225 ntBASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc28bQ8CEG5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc28bQ8CEG5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms