Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb7Q8CDY9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb7Q8CDY9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb7Q8CDY9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb7Q8CDY9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb7Q8CDY9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb7Q8CDY9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms