Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps53Q8CCB4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps53Q8CCB4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps53Q8CCB4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps53Q8CCB4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.93■□□□□ 0.78
Vps53Q8CCB4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Mir2861-201ENSMUST00000175539 82 ntBASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Mir6349-201ENSMUST00000184059 97 ntBASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps53Q8CCB4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Gm10418-201ENSMUST00000100943 576 ntBASIC19.91■□□□□ 0.78
Vps53Q8CCB4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps53Q8CCB4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps53Q8CCB4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Gm7367-201ENSMUST00000057611 492 ntBASIC19.89■□□□□ 0.77
Vps53Q8CCB4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps53Q8CCB4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Gm10819-201ENSMUST00000099988 561 ntBASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps53Q8CCB4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps53Q8CCB4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms