Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Gm7290-201ENSMUST00000104990 617 ntBASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Gm11927-201ENSMUST00000118472 759 ntBASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Gm12918-201ENSMUST00000120234 636 ntBASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Gm15710-201ENSMUST00000121821 636 ntBASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Gm5075-201ENSMUST00000196916 622 ntBASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Lysmd4Q8CC84 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd4Q8CC84 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd4Q8CC84 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd4Q8CC84 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd4Q8CC84 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd4Q8CC84 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd4Q8CC84 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Mtag2-201ENSMUST00000058665 714 ntBASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lysmd4Q8CC84 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms