Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.91■□□□□ 0.78
Shisa4Q8CA71 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Gm7213-201ENSMUST00000215977 950 ntBASIC19.9■□□□□ 0.78
Shisa4Q8CA71 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa4Q8CA71 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.89■□□□□ 0.78
Shisa4Q8CA71 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Shisa4Q8CA71 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Gm18958-201ENSMUST00000174258 762 ntBASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa4Q8CA71 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa4Q8CA71 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa4Q8CA71 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Gm18101-201ENSMUST00000215769 548 ntBASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa4Q8CA71 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Mir1668-201ENSMUST00000184114 107 ntBASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa4Q8CA71 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Gm13474-201ENSMUST00000122466 815 ntBASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms