Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm21559-201ENSMUST00000220638 855 ntBASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Gm8587-201ENSMUST00000076538 843 ntBASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Gm10013-201ENSMUST00000106074 672 ntBASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Gm18101-201ENSMUST00000215769 548 ntBASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx1Q8C8B0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx1Q8C8B0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Gm26039-201ENSMUST00000158152 144 ntBASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Gm6659-201ENSMUST00000174752 547 ntBASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx1Q8C8B0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx1Q8C8B0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Gm27389-201ENSMUST00000183622 195 ntBASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx1Q8C8B0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms