Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc60Q8C4J0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc60Q8C4J0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc60Q8C4J0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc60Q8C4J0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc60Q8C4J0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.83■■□□□ 1.08
Ccdc60Q8C4J0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
Ccdc60Q8C4J0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.83■■□□□ 1.08
Ccdc60Q8C4J0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc60Q8C4J0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc60Q8C4J0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc60Q8C4J0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Gm7889-201ENSMUST00000185591 958 ntBASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc60Q8C4J0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc60Q8C4J0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms