Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
Sh3rf3Q8C120 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf3Q8C120 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf3Q8C120 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf3Q8C120 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3rf3Q8C120 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3rf3Q8C120 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3rf3Q8C120 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms