Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek11Q8C0Q4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Gm43799-201ENSMUST00000201845 579 ntBASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nek11Q8C0Q4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Nek11Q8C0Q4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nek11Q8C0Q4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Gm18958-201ENSMUST00000174258 762 ntBASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek11Q8C0Q4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nek11Q8C0Q4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nek11Q8C0Q4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Gm2274-201ENSMUST00000184539 609 ntBASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Gm7370-201ENSMUST00000219471 767 ntBASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nek11Q8C0Q4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms