Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Gm3375-201ENSMUST00000203929 796 ntBASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Odf3b-204ENSMUST00000227834 930 ntBASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trub1Q8C0D0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trub1Q8C0D0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Mir5122-201ENSMUST00000175004 89 ntBASIC17.61■□□□□ 0.41
Trub1Q8C0D0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Gm21814-202ENSMUST00000203277 873 ntBASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Il3ra-202ENSMUST00000223589 738 ntBASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trub1Q8C0D0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms