Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Gm6211-202ENSMUST00000167849 925 ntBASIC15.13■□□□□ 0.01
SprnQ8BWU1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.13■□□□□ 0.01
SprnQ8BWU1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SprnQ8BWU1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.12■□□□□ 0.01
SprnQ8BWU1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SprnQ8BWU1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.11■□□□□ 0.01
SprnQ8BWU1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.11■□□□□ 0.01
SprnQ8BWU1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SprnQ8BWU1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.11■□□□□ 0.01
SprnQ8BWU1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SprnQ8BWU1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.1■□□□□ 0.01
SprnQ8BWU1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SprnQ8BWU1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.09■□□□□ 0.01
SprnQ8BWU1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.09■□□□□ 0.01
SprnQ8BWU1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.09■□□□□ 0.01
SprnQ8BWU1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SprnQ8BWU1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SprnQ8BWU1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.08■□□□□ 0.01
SprnQ8BWU1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SprnQ8BWU1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
SprnQ8BWU1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.08■□□□□ 0
SprnQ8BWU1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SprnQ8BWU1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SprnQ8BWU1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms