Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1aQ8BVF7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Gm2274-201ENSMUST00000184539 609 ntBASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Il3ra-202ENSMUST00000223589 738 ntBASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Aph1aQ8BVF7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Gm7889-201ENSMUST00000185591 958 ntBASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1aQ8BVF7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.09■□□□□ 0.01
Aph1aQ8BVF7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Aph1aQ8BVF7 Rarb-207ENSMUST00000225921 2756 ntBASIC15.08■□□□□ 0.01
Aph1aQ8BVF7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Aph1aQ8BVF7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.08■□□□□ 0.01
Aph1aQ8BVF7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Aph1aQ8BVF7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Aph1aQ8BVF7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Aph1aQ8BVF7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.08■□□□□ 0
Aph1aQ8BVF7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.08■□□□□ 0
Aph1aQ8BVF7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms