Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Gm7791-201ENSMUST00000219066 539 ntBASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp43Q8BUM9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp43Q8BUM9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp43Q8BUM9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp43Q8BUM9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms