Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.55■□□□□ 0.24
Cpne3Q8BT60 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Gm13158-201ENSMUST00000122007 736 ntBASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Gm6576-201ENSMUST00000169678 883 ntBASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne3Q8BT60 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne3Q8BT60 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne3Q8BT60 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne3Q8BT60 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.52■□□□□ 0.23
Cpne3Q8BT60 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne3Q8BT60 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne3Q8BT60 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne3Q8BT60 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne3Q8BT60 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne3Q8BT60 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Gm12441-201ENSMUST00000121806 588 ntBASIC16.5■□□□□ 0.23
Cpne3Q8BT60 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms