Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rd3Q8BRE0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Mir770-201ENSMUST00000103252 94 ntBASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rd3Q8BRE0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rd3Q8BRE0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rd3Q8BRE0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Mir8112-201ENSMUST00000184382 131 ntBASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Gm37722-201ENSMUST00000193757 208 ntBASIC18.14■□□□□ 0.49
Rd3Q8BRE0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rd3Q8BRE0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rd3Q8BRE0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rd3Q8BRE0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rd3Q8BRE0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rd3Q8BRE0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rd3Q8BRE0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rd3Q8BRE0 Gm18669-201ENSMUST00000216049 778 ntBASIC18.11■□□□□ 0.49
Rd3Q8BRE0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rd3Q8BRE0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rd3Q8BRE0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms