Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Gm13168-201ENSMUST00000121771 632 ntBASIC18.36■□□□□ 0.53
Nop53Q8BK35 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Trmt13-210ENSMUST00000198454 880 ntBASIC18.36■□□□□ 0.53
Nop53Q8BK35 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.36■□□□□ 0.53
Nop53Q8BK35 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Mir6349-201ENSMUST00000184059 97 ntBASIC18.35■□□□□ 0.53
Nop53Q8BK35 Gm10138-203ENSMUST00000206952 366 ntBASIC18.35■□□□□ 0.53
Nop53Q8BK35 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nop53Q8BK35 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.34■□□□□ 0.53
Nop53Q8BK35 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.34■□□□□ 0.53
Nop53Q8BK35 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nop53Q8BK35 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Nop53Q8BK35 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nop53Q8BK35 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nop53Q8BK35 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nop53Q8BK35 Gm11643-201ENSMUST00000119578 864 ntBASIC18.33■□□□□ 0.52
Nop53Q8BK35 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nop53Q8BK35 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nop53Q8BK35 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nop53Q8BK35 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nop53Q8BK35 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nop53Q8BK35 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nop53Q8BK35 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nop53Q8BK35 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.33■□□□□ 0.52
Nop53Q8BK35 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.33■□□□□ 0.52
Nop53Q8BK35 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nop53Q8BK35 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.31■□□□□ 0.52
Nop53Q8BK35 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms