Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc5a7Q8BGY9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Gm10418-201ENSMUST00000100943 576 ntBASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.03■□□□□ -0
Slc5a7Q8BGY9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc5a7Q8BGY9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Slc5a7Q8BGY9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Gm43017-201ENSMUST00000198296 752 ntBASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Gm13241-201ENSMUST00000094493 780 ntBASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Slc5a7Q8BGY9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Slc5a7Q8BGY9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms