Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim23Q8BGX0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim23Q8BGX0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim23Q8BGX0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim23Q8BGX0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.46■□□□□ 0.23
Trim23Q8BGX0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Gm18032-201ENSMUST00000222541 538 ntBASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim23Q8BGX0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms