Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Samm50Q8BGH2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.04■□□□□ 0.8
Samm50Q8BGH2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Gm43183-201ENSMUST00000200632 547 ntBASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samm50Q8BGH2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samm50Q8BGH2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samm50Q8BGH2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Samm50Q8BGH2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Samm50Q8BGH2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Samm50Q8BGH2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Samm50Q8BGH2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Samm50Q8BGH2 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.02■□□□□ 0.79
Samm50Q8BGH2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Samm50Q8BGH2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Samm50Q8BGH2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Mir1199-201ENSMUST00000117015 119 ntBASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samm50Q8BGH2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20■□□□□ 0.79
Samm50Q8BGH2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Gm29241-201ENSMUST00000189260 1096 ntBASIC20■□□□□ 0.79
Samm50Q8BGH2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20■□□□□ 0.79
Samm50Q8BGH2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Samm50Q8BGH2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20■□□□□ 0.79
Samm50Q8BGH2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Gm12382-201ENSMUST00000122005 922 ntBASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms