Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.19■□□□□ 0.5
Trim6Q8BGE7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim6Q8BGE7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.17■□□□□ 0.5
Trim6Q8BGE7 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim6Q8BGE7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim6Q8BGE7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim6Q8BGE7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim6Q8BGE7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.14■□□□□ 0.5
Trim6Q8BGE7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trim6Q8BGE7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms