Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.85■□□□□ 0.29
Ubp1Q811S7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.85■□□□□ 0.29
Ubp1Q811S7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubp1Q811S7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubp1Q811S7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ubp1Q811S7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ubp1Q811S7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ubp1Q811S7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ubp1Q811S7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ubp1Q811S7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ubp1Q811S7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.83■□□□□ 0.28
Ubp1Q811S7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Gm37025-201ENSMUST00000195159 829 ntBASIC16.83■□□□□ 0.28
Ubp1Q811S7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.83■□□□□ 0.28
Ubp1Q811S7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubp1Q811S7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubp1Q811S7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms