Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Gm11927-201ENSMUST00000118472 759 ntBASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upk3bQ80YF6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Mir6349-201ENSMUST00000184059 97 ntBASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk3bQ80YF6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Upk3bQ80YF6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.46□□□□□ -0.1
Upk3bQ80YF6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.46□□□□□ -0.1
Upk3bQ80YF6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Upk3bQ80YF6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.46□□□□□ -0.1
Upk3bQ80YF6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.46□□□□□ -0.1
Upk3bQ80YF6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Upk3bQ80YF6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk3bQ80YF6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms