Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrtm4Q80XG9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrtm4Q80XG9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lrrtm4Q80XG9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Gm7977-201ENSMUST00000193787 748 ntBASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrtm4Q80XG9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms