Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp6nlQ80XC3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp6nlQ80XC3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Gm27000-201ENSMUST00000182943 842 ntBASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp6nlQ80XC3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp6nlQ80XC3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp6nlQ80XC3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp6nlQ80XC3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Usp6nlQ80XC3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp6nlQ80XC3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp6nlQ80XC3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp6nlQ80XC3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp6nlQ80XC3 Mzt1-203ENSMUST00000227948 952 ntBASIC18.83■□□□□ 0.6
Usp6nlQ80XC3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp6nlQ80XC3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp6nlQ80XC3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Gm11336-201ENSMUST00000118168 334 ntBASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp6nlQ80XC3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Gm13186-201ENSMUST00000118031 316 ntBASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms