Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srrm3Q80WV7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Gm715-201ENSMUST00000117865 831 ntBASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srrm3Q80WV7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Srrm3Q80WV7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Gm15565-201ENSMUST00000118890 427 ntBASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srrm3Q80WV7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srrm3Q80WV7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms