Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.69■□□□□ 0.74
Prpf40bQ80W14 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Gm4974-201ENSMUST00000209974 875 ntBASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Gm7370-201ENSMUST00000219471 767 ntBASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prpf40bQ80W14 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Mir1668-201ENSMUST00000184114 107 ntBASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Gm7791-201ENSMUST00000219066 539 ntBASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Gm18115-201ENSMUST00000221209 621 ntBASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf40bQ80W14 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Gm8969-201ENSMUST00000199694 526 ntBASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf40bQ80W14 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf40bQ80W14 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms