Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim62Q80V85 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim62Q80V85 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim62Q80V85 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim62Q80V85 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim62Q80V85 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.71■□□□□ 0.43
Trim62Q80V85 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim62Q80V85 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim62Q80V85 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim62Q80V85 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.71■□□□□ 0.42
Trim62Q80V85 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim62Q80V85 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim62Q80V85 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Trim62Q80V85 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Mir5130-201ENSMUST00000175160 84 ntBASIC17.7■□□□□ 0.42
Trim62Q80V85 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim62Q80V85 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim62Q80V85 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim62Q80V85 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim62Q80V85 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim62Q80V85 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim62Q80V85 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim62Q80V85 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim62Q80V85 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim62Q80V85 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.68■□□□□ 0.42
Trim62Q80V85 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.67■□□□□ 0.42
Trim62Q80V85 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim62Q80V85 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim62Q80V85 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim62Q80V85 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim62Q80V85 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.66■□□□□ 0.42
Trim62Q80V85 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Gm9987-201ENSMUST00000069768 567 ntBASIC17.66■□□□□ 0.42
Trim62Q80V85 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim62Q80V85 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms