Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Usp8Q80U87 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp8Q80U87 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp8Q80U87 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp8Q80U87 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp8Q80U87 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp8Q80U87 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp8Q80U87 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.17■□□□□ 0.34
Usp8Q80U87 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp8Q80U87 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp8Q80U87 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp8Q80U87 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp8Q80U87 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp8Q80U87 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Usp8Q80U87 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp8Q80U87 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp8Q80U87 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.16■□□□□ 0.34
Usp8Q80U87 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp8Q80U87 Gm11249-201ENSMUST00000117071 859 ntBASIC17.16■□□□□ 0.34
Usp8Q80U87 Gm11643-201ENSMUST00000119578 864 ntBASIC17.16■□□□□ 0.34
Usp8Q80U87 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.16■□□□□ 0.34
Usp8Q80U87 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp8Q80U87 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp8Q80U87 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp8Q80U87 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp8Q80U87 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp8Q80U87 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp8Q80U87 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.15■□□□□ 0.34
Usp8Q80U87 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Gm13401-201ENSMUST00000117074 291 ntBASIC17.15■□□□□ 0.34
Usp8Q80U87 Gm15375-201ENSMUST00000119510 849 ntBASIC17.15■□□□□ 0.34
Usp8Q80U87 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.15■□□□□ 0.34
Usp8Q80U87 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.15■□□□□ 0.34
Usp8Q80U87 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp8Q80U87 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp8Q80U87 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp8Q80U87 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.14■□□□□ 0.33
Usp8Q80U87 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Usp8Q80U87 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Usp8Q80U87 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.14■□□□□ 0.33
Usp8Q80U87 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp8Q80U87 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp8Q80U87 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp8Q80U87 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.13■□□□□ 0.33
Usp8Q80U87 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.13■□□□□ 0.33
Usp8Q80U87 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp8Q80U87 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms