Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.72■□□□□ 0.59
Ush1gQ80T11 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Gm11355-201ENSMUST00000121120 306 ntBASIC18.71■□□□□ 0.59
Ush1gQ80T11 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Gm17808-201ENSMUST00000200859 894 ntBASIC18.71■□□□□ 0.59
Ush1gQ80T11 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ush1gQ80T11 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ush1gQ80T11 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Gm18669-201ENSMUST00000216049 778 ntBASIC18.7■□□□□ 0.58
Ush1gQ80T11 Il3ra-202ENSMUST00000223589 738 ntBASIC18.7■□□□□ 0.58
Ush1gQ80T11 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ush1gQ80T11 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Gm7153-201ENSMUST00000117092 455 ntBASIC18.69■□□□□ 0.58
Ush1gQ80T11 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Ush1gQ80T11 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Gm28033-201ENSMUST00000184224 96 ntBASIC18.69■□□□□ 0.58
Ush1gQ80T11 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.69■□□□□ 0.58
Ush1gQ80T11 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ush1gQ80T11 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.68■□□□□ 0.58
Ush1gQ80T11 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ush1gQ80T11 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ush1gQ80T11 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ush1gQ80T11 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ush1gQ80T11 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.67■□□□□ 0.58
Ush1gQ80T11 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ush1gQ80T11 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ush1gQ80T11 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms