Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38bQ80SY5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38bQ80SY5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.83■□□□□ 0.45
Prpf38bQ80SY5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38bQ80SY5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38bQ80SY5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Gm24589-201ENSMUST00000116692 94 ntBASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Gm37935-201ENSMUST00000192012 982 ntBASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38bQ80SY5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Gm38027-201ENSMUST00000192315 235 ntBASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38bQ80SY5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prpf38bQ80SY5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Mir3081-201ENSMUST00000175305 84 ntBASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Gm28659-201ENSMUST00000188013 759 ntBASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 AW822252-206ENSMUST00000208904 237 ntBASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Gm21559-201ENSMUST00000220638 855 ntBASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Gm8587-201ENSMUST00000076538 843 ntBASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38bQ80SY5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms