Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Gm17808-201ENSMUST00000200859 894 ntBASIC15.78■□□□□ 0.12
Pif1Q80SX8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.78■□□□□ 0.12
Pif1Q80SX8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pif1Q80SX8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Gm17807-201ENSMUST00000186869 298 ntBASIC15.77■□□□□ 0.12
Pif1Q80SX8 Gm17971-201ENSMUST00000190239 806 ntBASIC15.77■□□□□ 0.12
Pif1Q80SX8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pif1Q80SX8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pif1Q80SX8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pif1Q80SX8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.75■□□□□ 0.11
Pif1Q80SX8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Gm26039-201ENSMUST00000158152 144 ntBASIC15.75■□□□□ 0.11
Pif1Q80SX8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.75■□□□□ 0.11
Pif1Q80SX8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pif1Q80SX8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.74■□□□□ 0.11
Pif1Q80SX8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.74■□□□□ 0.11
Pif1Q80SX8 Gm28033-201ENSMUST00000184224 96 ntBASIC15.74■□□□□ 0.11
Pif1Q80SX8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pif1Q80SX8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pif1Q80SX8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms