Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdp1Q7TSG2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ctdp1Q7TSG2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdp1Q7TSG2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdp1Q7TSG2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Ctdp1Q7TSG2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Ctdp1Q7TSG2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdp1Q7TSG2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdp1Q7TSG2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdp1Q7TSG2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms