Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Gm5364-201ENSMUST00000216789 889 ntBASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Scn10aQ6QIY3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn10aQ6QIY3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.39■□□□□ 0.7
Scn10aQ6QIY3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.39■□□□□ 0.7
Scn10aQ6QIY3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn10aQ6QIY3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Gm11594-201ENSMUST00000122313 162 ntBASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn10aQ6QIY3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn10aQ6QIY3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Gm8000-201ENSMUST00000188378 592 ntBASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Gm25990-201ENSMUST00000102440 86 ntBASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Gm7230-201ENSMUST00000173026 815 ntBASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scn10aQ6QIY3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn10aQ6QIY3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.35■□□□□ 0.69
Scn10aQ6QIY3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn10aQ6QIY3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Scn10aQ6QIY3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.33■□□□□ 0.69
Scn10aQ6QIY3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Scn10aQ6QIY3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Scn10aQ6QIY3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn10aQ6QIY3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Scn10aQ6QIY3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn10aQ6QIY3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.33■□□□□ 0.68
Scn10aQ6QIY3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms