Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Gm27704-201ENSMUST00000185094 107 ntBASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx58Q6Q899 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Ddx58Q6Q899 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx58Q6Q899 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx58Q6Q899 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx58Q6Q899 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx58Q6Q899 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Gm11950-201ENSMUST00000121615 838 ntBASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.14■□□□□ 0.97
Ddx58Q6Q899 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Gm13186-201ENSMUST00000118031 316 ntBASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Ank2-226ENSMUST00000189368 339 ntBASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx58Q6Q899 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Mir770-201ENSMUST00000103252 94 ntBASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx58Q6Q899 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Gm6623-201ENSMUST00000173570 544 ntBASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Ddx58Q6Q899 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms