Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Gm24841-201ENSMUST00000158676 357 ntBASIC14.4□□□□□ -0.1
Rif1Q6PR54 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rif1Q6PR54 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Gm13036-201ENSMUST00000117799 748 ntBASIC14.39□□□□□ -0.11
Rif1Q6PR54 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.39□□□□□ -0.11
Rif1Q6PR54 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rif1Q6PR54 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.38□□□□□ -0.11
Rif1Q6PR54 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.38□□□□□ -0.11
Rif1Q6PR54 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rif1Q6PR54 Gm15173-201ENSMUST00000122049 433 ntBASIC14.37□□□□□ -0.11
Rif1Q6PR54 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.37□□□□□ -0.11
Rif1Q6PR54 AV026068-213ENSMUST00000223675 1171 ntBASIC14.37□□□□□ -0.11
Rif1Q6PR54 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.37□□□□□ -0.11
Rif1Q6PR54 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.37□□□□□ -0.11
Rif1Q6PR54 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.37□□□□□ -0.11
Rif1Q6PR54 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rif1Q6PR54 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Gm11336-201ENSMUST00000118168 334 ntBASIC14.36□□□□□ -0.11
Rif1Q6PR54 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Gm6550-201ENSMUST00000187574 993 ntBASIC14.36□□□□□ -0.11
Rif1Q6PR54 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.36□□□□□ -0.11
Rif1Q6PR54 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms