Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Chd4Q6PDQ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Chd4Q6PDQ2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Chd4Q6PDQ2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Chd4Q6PDQ2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC22.33■■□□□ 1.16
Chd4Q6PDQ2 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.33■■□□□ 1.16
Chd4Q6PDQ2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
Chd4Q6PDQ2 Mir8098-201ENSMUST00000184011 137 ntBASIC22.32■■□□□ 1.16
Chd4Q6PDQ2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Chd4Q6PDQ2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chd4Q6PDQ2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC22.32■■□□□ 1.16
Chd4Q6PDQ2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Chd4Q6PDQ2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC22.32■■□□□ 1.16
Chd4Q6PDQ2 Gm12895-201ENSMUST00000122214 226 ntBASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Gm43347-201ENSMUST00000200226 580 ntBASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Gm15372-201ENSMUST00000120729 834 ntBASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Chd4Q6PDQ2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Gm29707-201ENSMUST00000196325 491 ntBASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd4Q6PDQ2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm12644-201ENSMUST00000119935 606 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44357-201ENSMUST00000195897 142 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm19658-201ENSMUST00000196231 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44367-201ENSMUST00000196836 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44350-201ENSMUST00000197197 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44390-201ENSMUST00000197533 144 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44313-201ENSMUST00000198018 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44486-201ENSMUST00000198508 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44454-201ENSMUST00000198541 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44314-201ENSMUST00000199263 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44394-201ENSMUST00000199558 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44484-201ENSMUST00000199873 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44466-201ENSMUST00000200264 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm44359-201ENSMUST00000200671 138 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 AW822252-206ENSMUST00000208904 237 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Gm7935-201ENSMUST00000100555 1278 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd4Q6PDQ2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Gm28659-201ENSMUST00000188013 759 ntBASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC22.28■■□□□ 1.16
Chd4Q6PDQ2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Rprl3-201ENSMUST00000157400 290 ntBASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms