Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ShbQ6PD21 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ShbQ6PD21 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShbQ6PD21 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.52■□□□□ 0.56
ShbQ6PD21 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.52■□□□□ 0.56
ShbQ6PD21 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.52■□□□□ 0.56
ShbQ6PD21 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ShbQ6PD21 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShbQ6PD21 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.52■□□□□ 0.56
ShbQ6PD21 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ShbQ6PD21 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ShbQ6PD21 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.52■□□□□ 0.55
ShbQ6PD21 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.51■□□□□ 0.55
ShbQ6PD21 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.51■□□□□ 0.55
ShbQ6PD21 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.51■□□□□ 0.55
ShbQ6PD21 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Fst-202ENSMUST00000223640 2612 ntBASIC18.51■□□□□ 0.55
ShbQ6PD21 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.51■□□□□ 0.55
ShbQ6PD21 Gm13418-201ENSMUST00000119097 944 ntBASIC18.51■□□□□ 0.55
ShbQ6PD21 Gm14822-201ENSMUST00000122247 291 ntBASIC18.51■□□□□ 0.55
ShbQ6PD21 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.51■□□□□ 0.55
ShbQ6PD21 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.51■□□□□ 0.55
ShbQ6PD21 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ShbQ6PD21 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ShbQ6PD21 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShbQ6PD21 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ShbQ6PD21 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ShbQ6PD21 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.49■□□□□ 0.55
ShbQ6PD21 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.49■□□□□ 0.55
ShbQ6PD21 Gm9727-201ENSMUST00000161387 555 ntBASIC18.49■□□□□ 0.55
ShbQ6PD21 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ShbQ6PD21 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.49■□□□□ 0.55
ShbQ6PD21 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.49■□□□□ 0.55
ShbQ6PD21 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.49■□□□□ 0.55
ShbQ6PD21 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ShbQ6PD21 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShbQ6PD21 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.48■□□□□ 0.55
ShbQ6PD21 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ShbQ6PD21 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Gm14140-201ENSMUST00000119999 995 ntBASIC18.48■□□□□ 0.55
ShbQ6PD21 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.48■□□□□ 0.55
ShbQ6PD21 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
ShbQ6PD21 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.48■□□□□ 0.55
ShbQ6PD21 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms