Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Abcf1Q6P542 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcf1Q6P542 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Abcf1Q6P542 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Abcf1Q6P542 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Abcf1Q6P542 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.14■□□□□ 0.65
Abcf1Q6P542 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.14■□□□□ 0.65
Abcf1Q6P542 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcf1Q6P542 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Gm11249-201ENSMUST00000117071 859 ntBASIC19.13■□□□□ 0.65
Abcf1Q6P542 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcf1Q6P542 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.12■□□□□ 0.65
Abcf1Q6P542 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcf1Q6P542 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Gm38285-201ENSMUST00000192928 922 ntBASIC19.11■□□□□ 0.65
Abcf1Q6P542 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcf1Q6P542 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Gm11927-201ENSMUST00000118472 759 ntBASIC19.1■□□□□ 0.65
Abcf1Q6P542 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms