Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hdac4Q6NZM9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hdac4Q6NZM9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Gm27000-201ENSMUST00000182943 842 ntBASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Gm7791-201ENSMUST00000219066 539 ntBASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hdac4Q6NZM9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hdac4Q6NZM9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac4Q6NZM9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac4Q6NZM9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hdac4Q6NZM9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms