Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a2Q64739 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.75■□□□□ 0.91
Col11a2Q64739 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a2Q64739 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a2Q64739 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a2Q64739 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a2Q64739 Gm15173-201ENSMUST00000122049 433 ntBASIC20.75■□□□□ 0.91
Col11a2Q64739 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col11a2Q64739 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
Col11a2Q64739 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a2Q64739 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.74■□□□□ 0.91
Col11a2Q64739 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Col11a2Q64739 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Gm23935-201ENSMUST00000102303 57 ntBASIC20.74■□□□□ 0.91
Col11a2Q64739 Gm24270-201ENSMUST00000102326 57 ntBASIC20.74■□□□□ 0.91
Col11a2Q64739 Gm24245-201ENSMUST00000157318 57 ntBASIC20.74■□□□□ 0.91
Col11a2Q64739 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.74■□□□□ 0.91
Col11a2Q64739 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.74■□□□□ 0.91
Col11a2Q64739 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a2Q64739 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.73■□□□□ 0.91
Col11a2Q64739 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.73■□□□□ 0.91
Col11a2Q64739 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a2Q64739 Gm44430-201ENSMUST00000203376 995 ntBASIC20.73■□□□□ 0.91
Col11a2Q64739 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Col11a2Q64739 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.72■□□□□ 0.91
Col11a2Q64739 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Col11a2Q64739 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Col11a2Q64739 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.72■□□□□ 0.91
Col11a2Q64739 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.72■□□□□ 0.91
Col11a2Q64739 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Col11a2Q64739 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.72■□□□□ 0.91
Col11a2Q64739 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a2Q64739 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col11a2Q64739 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.71■□□□□ 0.91
Col11a2Q64739 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col11a2Q64739 Gm15467-201ENSMUST00000120582 445 ntBASIC20.71■□□□□ 0.91
Col11a2Q64739 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col11a2Q64739 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a2Q64739 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.7■□□□□ 0.9
Col11a2Q64739 Gm7506-201ENSMUST00000207758 815 ntBASIC20.7■□□□□ 0.9
Col11a2Q64739 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.7■□□□□ 0.9
Col11a2Q64739 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Gm14494-201ENSMUST00000118786 435 ntBASIC20.7■□□□□ 0.9
Col11a2Q64739 Gm14822-201ENSMUST00000122247 291 ntBASIC20.7■□□□□ 0.9
Col11a2Q64739 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms