Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.21□□□□□ -0.13
Col7a1Q63870 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.21□□□□□ -0.13
Col7a1Q63870 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.21□□□□□ -0.13
Col7a1Q63870 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col7a1Q63870 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col7a1Q63870 Golph3-202ENSMUST00000226517 2359 ntBASIC14.21□□□□□ -0.13
Col7a1Q63870 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col7a1Q63870 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.21□□□□□ -0.13
Col7a1Q63870 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col7a1Q63870 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col7a1Q63870 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.21□□□□□ -0.13
Col7a1Q63870 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col7a1Q63870 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col7a1Q63870 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col7a1Q63870 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col7a1Q63870 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col7a1Q63870 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col7a1Q63870 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col7a1Q63870 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Col7a1Q63870 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.2□□□□□ -0.14
Col7a1Q63870 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.2□□□□□ -0.14
Col7a1Q63870 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col7a1Q63870 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.2□□□□□ -0.14
Col7a1Q63870 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col7a1Q63870 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col7a1Q63870 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col7a1Q63870 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col7a1Q63870 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.19□□□□□ -0.14
Col7a1Q63870 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.19□□□□□ -0.14
Col7a1Q63870 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.19□□□□□ -0.14
Col7a1Q63870 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.19□□□□□ -0.14
Col7a1Q63870 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col7a1Q63870 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col7a1Q63870 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Col7a1Q63870 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Gm13186-201ENSMUST00000118031 316 ntBASIC14.18□□□□□ -0.14
Col7a1Q63870 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.18□□□□□ -0.14
Col7a1Q63870 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.18□□□□□ -0.14
Col7a1Q63870 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.18□□□□□ -0.14
Col7a1Q63870 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col7a1Q63870 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col7a1Q63870 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col7a1Q63870 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col7a1Q63870 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col7a1Q63870 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col7a1Q63870 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.17□□□□□ -0.14
Col7a1Q63870 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Gm44450-201ENSMUST00000199528 114 ntBASIC14.17□□□□□ -0.14
Col7a1Q63870 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col7a1Q63870 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.17□□□□□ -0.14
Col7a1Q63870 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col7a1Q63870 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms