Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Six2Q62232 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.21■□□□□ 0.51
Six2Q62232 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.21■□□□□ 0.51
Six2Q62232 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Gm21814-202ENSMUST00000203277 873 ntBASIC18.21■□□□□ 0.51
Six2Q62232 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.21■□□□□ 0.51
Six2Q62232 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.21■□□□□ 0.51
Six2Q62232 Gm7791-201ENSMUST00000219066 539 ntBASIC18.21■□□□□ 0.51
Six2Q62232 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.21■□□□□ 0.51
Six2Q62232 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.21■□□□□ 0.51
Six2Q62232 Odf3b-204ENSMUST00000227834 930 ntBASIC18.21■□□□□ 0.51
Six2Q62232 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.21■□□□□ 0.51
Six2Q62232 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Six2Q62232 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Six2Q62232 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Six2Q62232 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.2■□□□□ 0.5
Six2Q62232 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.2■□□□□ 0.5
Six2Q62232 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.2■□□□□ 0.5
Six2Q62232 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.2■□□□□ 0.5
Six2Q62232 Mir5122-201ENSMUST00000175004 89 ntBASIC18.2■□□□□ 0.5
Six2Q62232 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Six2Q62232 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Six2Q62232 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six2Q62232 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six2Q62232 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.19■□□□□ 0.5
Six2Q62232 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six2Q62232 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six2Q62232 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Six2Q62232 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Six2Q62232 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six2Q62232 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Six2Q62232 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Six2Q62232 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Six2Q62232 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.19■□□□□ 0.5
Six2Q62232 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Six2Q62232 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Six2Q62232 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six2Q62232 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Six2Q62232 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Six2Q62232 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Six2Q62232 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.18■□□□□ 0.5
Six2Q62232 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Six2Q62232 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.18■□□□□ 0.5
Six2Q62232 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Six2Q62232 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Six2Q62232 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six2Q62232 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Six2Q62232 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Six2Q62232 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.17■□□□□ 0.5
Six2Q62232 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Six2Q62232 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Six2Q62232 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Six2Q62232 Gm10812-201ENSMUST00000099864 546 ntBASIC18.17■□□□□ 0.5
Six2Q62232 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six2Q62232 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Six2Q62232 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms