Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.56■□□□□ 0.4
Six1Q62231 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.56■□□□□ 0.4
Six1Q62231 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.56■□□□□ 0.4
Six1Q62231 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.55■□□□□ 0.4
Six1Q62231 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six1Q62231 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six1Q62231 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six1Q62231 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six1Q62231 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Six1Q62231 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Six1Q62231 Gm17661-201ENSMUST00000170317 270 ntBASIC17.55■□□□□ 0.4
Six1Q62231 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Six1Q62231 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six1Q62231 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six1Q62231 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six1Q62231 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.54■□□□□ 0.4
Six1Q62231 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.54■□□□□ 0.4
Six1Q62231 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Six1Q62231 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.54■□□□□ 0.4
Six1Q62231 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Six1Q62231 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.54■□□□□ 0.4
Six1Q62231 Gm18666-201ENSMUST00000190039 958 ntBASIC17.54■□□□□ 0.4
Six1Q62231 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Six1Q62231 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Six1Q62231 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six1Q62231 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.53■□□□□ 0.4
Six1Q62231 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.53■□□□□ 0.4
Six1Q62231 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Six1Q62231 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.53■□□□□ 0.4
Six1Q62231 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six1Q62231 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Six1Q62231 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.52■□□□□ 0.4
Six1Q62231 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.52■□□□□ 0.4
Six1Q62231 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six1Q62231 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Six1Q62231 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six1Q62231 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six1Q62231 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six1Q62231 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Six1Q62231 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Six1Q62231 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.51■□□□□ 0.39
Six1Q62231 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.51■□□□□ 0.39
Six1Q62231 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Six1Q62231 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms