Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn9aQ62205 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Gm5264-201ENSMUST00000190584 848 ntBASIC20.15■□□□□ 0.82
Scn9aQ62205 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.15■□□□□ 0.82
Scn9aQ62205 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.15■□□□□ 0.82
Scn9aQ62205 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Scn9aQ62205 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.15■□□□□ 0.82
Scn9aQ62205 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.15■□□□□ 0.82
Scn9aQ62205 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Scn9aQ62205 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Gm18421-201ENSMUST00000204122 625 ntBASIC20.15■□□□□ 0.82
Scn9aQ62205 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.15■□□□□ 0.82
Scn9aQ62205 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Scn9aQ62205 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Scn9aQ62205 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn9aQ62205 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.14■□□□□ 0.82
Scn9aQ62205 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Scn9aQ62205 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn9aQ62205 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn9aQ62205 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.14■□□□□ 0.81
Scn9aQ62205 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn9aQ62205 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn9aQ62205 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn9aQ62205 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn9aQ62205 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn9aQ62205 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn9aQ62205 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn9aQ62205 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Scn9aQ62205 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Scn9aQ62205 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.13■□□□□ 0.81
Scn9aQ62205 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Gm4995-201ENSMUST00000117247 432 ntBASIC20.13■□□□□ 0.81
Scn9aQ62205 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.13■□□□□ 0.81
Scn9aQ62205 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Scn9aQ62205 Gm44450-201ENSMUST00000199528 114 ntBASIC20.13■□□□□ 0.81
Scn9aQ62205 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn9aQ62205 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Scn9aQ62205 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scn9aQ62205 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Scn9aQ62205 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn9aQ62205 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn9aQ62205 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn9aQ62205 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn9aQ62205 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.11■□□□□ 0.81
Scn9aQ62205 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scn9aQ62205 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.11■□□□□ 0.81
Scn9aQ62205 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.11■□□□□ 0.81
Scn9aQ62205 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Scn9aQ62205 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn9aQ62205 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn9aQ62205 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.1■□□□□ 0.81
Scn9aQ62205 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.1■□□□□ 0.81
Scn9aQ62205 Gm43575-201ENSMUST00000196420 516 ntBASIC20.1■□□□□ 0.81
Scn9aQ62205 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Scn9aQ62205 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Scn9aQ62205 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.1■□□□□ 0.81
Scn9aQ62205 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.1■□□□□ 0.81
Scn9aQ62205 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.1■□□□□ 0.81
Scn9aQ62205 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms