Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim27Q62158 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Trim27Q62158 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Gm4217-201ENSMUST00000182243 1002 ntBASIC21■□□□□ 0.95
Trim27Q62158 Gm37055-201ENSMUST00000191866 133 ntBASIC21■□□□□ 0.95
Trim27Q62158 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Gm5417-201ENSMUST00000079706 384 ntBASIC21■□□□□ 0.95
Trim27Q62158 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21■□□□□ 0.95
Trim27Q62158 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim27Q62158 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.99■□□□□ 0.95
Trim27Q62158 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim27Q62158 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim27Q62158 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim27Q62158 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.99■□□□□ 0.95
Trim27Q62158 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim27Q62158 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim27Q62158 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim27Q62158 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim27Q62158 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim27Q62158 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim27Q62158 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim27Q62158 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.98■□□□□ 0.95
Trim27Q62158 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim27Q62158 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim27Q62158 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim27Q62158 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim27Q62158 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim27Q62158 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Trim27Q62158 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim27Q62158 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim27Q62158 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Trim27Q62158 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim27Q62158 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim27Q62158 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.96■□□□□ 0.95
Trim27Q62158 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim27Q62158 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim27Q62158 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim27Q62158 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim27Q62158 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim27Q62158 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim27Q62158 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim27Q62158 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim27Q62158 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim27Q62158 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.95■□□□□ 0.94
Trim27Q62158 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim27Q62158 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim27Q62158 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim27Q62158 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim27Q62158 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim27Q62158 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim27Q62158 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms