Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Gm29791-202ENSMUST00000207888 369 ntBASIC16.37■□□□□ 0.21
Runx1t1Q61909 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.37■□□□□ 0.21
Runx1t1Q61909 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Runx1t1Q61909 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Runx1t1Q61909 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.36■□□□□ 0.21
Runx1t1Q61909 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.36■□□□□ 0.21
Runx1t1Q61909 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Runx1t1Q61909 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.35■□□□□ 0.21
Runx1t1Q61909 Gm10138-203ENSMUST00000206952 366 ntBASIC16.35■□□□□ 0.21
Runx1t1Q61909 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.35■□□□□ 0.21
Runx1t1Q61909 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.35■□□□□ 0.21
Runx1t1Q61909 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Runx1t1Q61909 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Gm13401-201ENSMUST00000117074 291 ntBASIC16.34■□□□□ 0.21
Runx1t1Q61909 Gm37856-201ENSMUST00000191634 999 ntBASIC16.34■□□□□ 0.21
Runx1t1Q61909 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Runx1t1Q61909 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Runx1t1Q61909 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Runx1t1Q61909 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Runx1t1Q61909 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Runx1t1Q61909 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Runx1t1Q61909 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Runx1t1Q61909 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Runx1t1Q61909 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Gm15375-201ENSMUST00000119510 849 ntBASIC16.33■□□□□ 0.2
Runx1t1Q61909 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Runx1t1Q61909 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms