Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rai1Q61818 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.46■□□□□ 0.23
Rai1Q61818 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.46■□□□□ 0.23
Rai1Q61818 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.46■□□□□ 0.23
Rai1Q61818 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.46■□□□□ 0.23
Rai1Q61818 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.46■□□□□ 0.23
Rai1Q61818 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rai1Q61818 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rai1Q61818 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rai1Q61818 Gm12644-201ENSMUST00000119935 606 ntBASIC16.46■□□□□ 0.22
Rai1Q61818 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rai1Q61818 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rai1Q61818 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.46■□□□□ 0.22
Rai1Q61818 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Rai1Q61818 Rps4l-201ENSMUST00000071745 943 ntBASIC16.46■□□□□ 0.22
Rai1Q61818 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rai1Q61818 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rai1Q61818 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.45■□□□□ 0.22
Rai1Q61818 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.45■□□□□ 0.22
Rai1Q61818 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.45■□□□□ 0.22
Rai1Q61818 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.45■□□□□ 0.22
Rai1Q61818 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rai1Q61818 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rai1Q61818 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rai1Q61818 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.44■□□□□ 0.22
Rai1Q61818 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.44■□□□□ 0.22
Rai1Q61818 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rai1Q61818 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.44■□□□□ 0.22
Rai1Q61818 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rai1Q61818 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Gm10052-201ENSMUST00000168019 960 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rai1Q61818 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44357-201ENSMUST00000195897 142 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm19658-201ENSMUST00000196231 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44367-201ENSMUST00000196836 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44350-201ENSMUST00000197197 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44390-201ENSMUST00000197533 144 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44313-201ENSMUST00000198018 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44486-201ENSMUST00000198508 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44454-201ENSMUST00000198541 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44314-201ENSMUST00000199263 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44394-201ENSMUST00000199558 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44484-201ENSMUST00000199873 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44466-201ENSMUST00000200264 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm44359-201ENSMUST00000200671 138 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Gm7729-201ENSMUST00000050143 801 ntBASIC16.43■□□□□ 0.22
Rai1Q61818 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rai1Q61818 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.42■□□□□ 0.22
Rai1Q61818 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.42■□□□□ 0.22
Rai1Q61818 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rai1Q61818 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms